RICE PANICLE DISEASE AND ITS MANAGEMENT STRATEGIES
Keywords:
Bacterial Leaf Blight, Marker-Assisted Selection, Plant Growth-Promoting Rhizobacteria, Bacterial Blight Resistance GeneAbstract
Rice cultivation in Pakistan is important for local food security and international trade, especially through export of popular brands like Kernel and Super Basmati. However, the industry faces significant challenges from various biotic and abiotic stresses, including leaf blight (BLB) caused by Thomonas oryzae PV. which can cause decline. The prevalence of BLB is increasing in Pakistan, affecting weak Basmati varieties and causing up to 30% crop failure, especially when the disease occurs during the critical growth period. This disease and others like bacterial infection caused by Burkholderia glumae, demonstrate the interaction between bacteria, climate change (such as temperature and humidity) and genetics. MAS promote Plant Growth-Promoting Rhizobacteria (PGPR) which are medicinal and antibacterial. Extensive research has identified several genes (R genes) against BLB such as XA1, XA21 and XA7, which have been successfully incorporated into various rice varieties to enhance disease resistance. Genetic modification, although promising for rapid incorporation of protective genes, requires careful monitoring to ensure safety and efficacy across generations. Crop production, and entrance screening, including in wild rice, also play an important role in identifying emerging sources of disease resistance. Future research will focus on developing these technologies to improve crop production and disease resistance, thereby protecting food security in Pakistan and beyond.
Downloads
References
Abbas, A., Arshad, A., Rehman, A. U., Bukhari, M. S., and Zaman, S. (2024a). Revolutionizing plant breeding programs with advancements in molecular marker-assisted selection. Bulletin of Biological and Allied Sciences Research 2024, 57.
Abbas, A., Rashad, A., Rehman, A. U., and Bukhari, M. S. (2024b). Exploring the response mechanisms of rice to salinity stress. Bulletin of Biological and Allied Sciences Research 2024, 58.
Afroz, A., Qureshi, A., Zahur, M., Rashid, U., and Rashid, H. (2012). Transgenic lines of Oryza sativa (Basmati 2000) expressing Xa21 demonstrate enhanced resistance to bacterial blight. Plant Molecular Biology Reporter 30, 204-213.
ALI, S. (2022). Response of rice under salt stress. Biological and Agricultural Sciences Research Journal 2022, 6-6.
Babujee, L., and Gnanamanickam, S. (2000). Molecular tools for characterization of rice blast pathogen (Magnaporthe grisea) population and molecular marker-assisted breeding for disease resistance. Current Science-Bangalore- 78, 248-257.
Bashar, M., Hossain, M., Rahman, M., Uddin, M., and Begum, M. (2010). Biological control of sheath blight disease of rice by using antagonistic bacteria. Bangladesh Journal of Scientific and Industrial Research 45, 225-232.
Bhasin, H., Bhatia, D., Raghuvanshi, S., Lore, J. S., Sahi, G. K., Kaur, B., Vikal, Y., and Singh, K. (2012). New PCR-based sequence-tagged site marker for bacterial blight resistance gene Xa38 of rice. Molecular breeding 30, 607-611.
Bryan, G. T., Wu, K.-S., Farrall, L., Jia, Y., Hershey, H. P., McAdams, S. A., Faulk, K. N., Donaldson, G. K., Tarchini, R., and Valent, B. (2000). A single amino acid difference distinguishes resistant and susceptible alleles of the rice blast resistance gene Pi-ta. The Plant Cell 12, 2033-2045.
Chen, J., Shi, Y., Liu, W., Chai, R., Fu, Y., Zhuang, J., and Wu, J. (2011). A Pid3 allele from rice cultivar Gumei2 confers resistance to Magnaporthe oryzae. Journal of Genetics and Genomics 38, 209-216.
Compant, S., Duffy, B., Nowak, J., Clément, C., and Barka, E. A. (2005). Use of plant growth-promoting bacteria for biocontrol of plant diseases: principles, mechanisms of action, and future prospects. Applied and environmental microbiology 71, 4951-4959.
Crist, E., Mora, C., and Engelman, R. (2017). The interaction of human population, food production, and biodiversity protection. Science 356, 260-264.
Francis, F., Kim, J., Ramaraj, T., Farmer, A., Rush, M. C., and Ham, J. H. (2013). Comparative genomic analysis of two Burkholderia glumae strains from different geographic origins reveals a high degree of plasticity in genome structure associated with genomic islands. Molecular genetics and genomics 288, 195-203.
Fujii, K. (1999). Gene analysis of panicle blast resistance in rice cultivars with rice stripe resistance. Breed. Res. 1, 203-210.
Gnanamanickam, S. S. (2009). "Biological control of rice diseases," Springer Science & Business Media.
Ham, J. H., Melanson, R. A., and Rush, M. C. (2011). Burkholderia glumae: next major pathogen of rice? Molecular plant pathology 12, 329-339.
Hayashi, K., Yasuda, N., Fujita, Y., Koizumi, S., and Yoshida, H. (2010). Identification of the blast resistance gene Pit in rice cultivars using functional markers. Theoretical and applied genetics 121, 1357-1367.
Hemal Bhasin, H. B., Dharminder Bhatia, D. B., Saurabh Raghuvanshi, S. R., Lore, J., Sahi, G., Baljit Kaur, B. K., Yogesh Vikal, Y. V., and Kuldeep Singh, K. S. (2012). New PCR-based sequence-tagged site marker for bacterial blight resistance gene Xa38 of rice.
Hua, L., Wu, J., Chen, C., Wu, W., He, X., Lin, F., Wang, L., Ashikawa, I., Matsumoto, T., and Wang, L. (2012). The isolation of Pi1, an allele at the Pik locus which confers broad spectrum resistance to rice blast. Theoretical and applied genetics 125, 1047-1055.
Javed, M. M., Sami, A., Haider, M. Z., Abbas, A., Ali, M. H., Naeem, S., Amjad, M., Ahmad, A., and Bostani, R. (2024). The contribution of transgenic rice to enhance grain yield. Bulletin of Biological and Allied Sciences Research 2024, 65.
Joshi, B. K., Bimb, H. P., Parajuli, G., and Chaudhary, B. (2009). Molecular tagging, allele mining and marker aided breeding for blast resistance in rice. BSN e-Bulletin 1, 1-23.
Junaid, M. D., and Gokce, A. F. (2024). GLOBAL AGRICULTURAL LOSSES AND THEIR CAUSES. Bulletin of Biological and Allied Sciences Research 2024, 66.
Karki, H. S., and Ham, J. H. (2014). The roles of the shikimate pathway genes, aroA and aroB, in virulence, growth and UV tolerance of B urkholderia glumae strain 411gr‐6. Molecular plant pathology 15, 940-947.
Khan, J. A., Arshad, H. M. I., Saleem, K., Sandhu, A. F., Hasnain, S., and Babar, M. M. (2012). Evaluation of resistance genes in rice against local isolates of Xanthomonas oryzae pv. oryzae in Punjab Province of Pakistan. Archives of Phytopathology and Plant Protection 45, 1826-1839.
Khush, G. S. (2005). What it will take to feed 5.0 billion rice consumers in 2030. Plant molecular biology 59, 1-6.
Liu, X., Wang, L., Chen, S., Lin, F., and Pan, Q. (2005). Genetic and physical mapping of Pi36 (t), a novel rice blast resistance gene located on rice chromosome 8. Molecular Genetics and Genomics 274, 394-401.
Luo, Y., Sangha, J. S., Wang, S., Li, Z., Yang, J., and Yin, Z. (2012). Marker-assisted breeding of Xa4, Xa21 and Xa27 in the restorer lines of hybrid rice for broad-spectrum and enhanced disease resistance to bacterial blight. Molecular breeding 30, 1601-1610.
Maeda, Y., Shinohara, H., Kiba, A., Ohnishi, K., Furuya, N., Kawamura, Y., Ezaki, T., Vandamme, P., Tsushima, S., and Hikichi, Y. (2006). Phylogenetic study and multiplex PCR-based detection of Burkholderia plantarii, Burkholderia glumae and Burkholderia gladioli using gyrB and rpoD sequences. International Journal of Systematic and Evolutionary Microbiology 56, 1031-1038.
Miah, G., Rafii, M., Ismail, M., Puteh, A., Rahim, H., Asfaliza, R., and Latif, M. (2013). Blast resistance in rice: a review of conventional breeding to molecular approaches. Molecular biology reports 40, 2369-2388.
Miyagawa, H. (2000). Biocontrol of bacterial seedling blight of rice caused by Burkholderia gladioli using with its avirulent isolate. Japanese Journal of Phytopathology 66, 232-238.
Mulaw, T., Wamishe, Y., and Jia, Y. (2018). Characterization and in plant detection of bacteria that cause bacterial panicle blight of rice. American Journal of Plant Sciences 9, 667-684.
Nandakumar, R., Shahjahan, A., Yuan, X., Dickstein, E., Groth, D., Clark, C., Cartwright, R., and Rush, M. (2009). Burkholderia glumae and B. gladioli cause bacterial panicle blight in rice in the southern United States. Plant Disease 93, 896-905.
Ortega, L., and Rojas, C. M. (2021). Bacterial panicle blight and Burkholderia glumae: from pathogen biology to disease control. Phytopathology® 111, 772-778.
Pinson, S., SHAHJAHAN, A.-B. R. C., RUSH, M., CENTER, L., and GROTH, D. (2010). Bacterial panicle blight resistance QTL in rice (Oryza sativa L.) and their association with resistance to other diseases. Crop Science 50, 1287-1297.
Rasheed, M., and Malik, A. (2022). Mechanism of drought stress tolerance in wheat. Bulletin of Biological and Allied Sciences Research 2022, 23-23.
Rasheed, M. U., Malik, A., and Ali, M. S. (2024). Genetic variation and heritability estimates in chickpea seedling traits: implications for breeding programs. Bulletin of Biological and Allied Sciences Research 2024, 59.
Sharma, T., Rai, A., Gupta, S., Vijayan, J., Devanna, B., and Ray, S. (2012). Rice blast management through host-plant resistance: retrospect and prospects. Agricultural Research 1, 37-52.
Sharma, T., Shanker, P., Singh, B., Jana, T., Madhav, M., Gaikwad, K., Singh, N., Plaha, P., and Rathour, R. (2005). Molecular mapping of rice blast resistance gene Pi-k h in the rice variety Tetep. Journal of Plant Biochemistry and Biotechnology 14, 127-133.
Valent, B., and Chumley, F. (1989). Genes for cultivar specificity in the rice blast fungus, Magnaporthe grisea. In "Signal Molecules in Plants and Plant-Microbe Interactions", pp. 415-422. Springer.
Verdier, V., Cruz, C. V., and Leach, J. E. (2012). Controlling rice bacterial blight in Africa: needs and prospects. Journal of biotechnology 159, 320-328.
Webster, R. K., and Gunnell, P. S. (1992). "Compendium of rice diseases."
Weerakoon, W., Maruyama, A., and Ohba, K. (2008). Impact of humidity on temperature‐induced grain sterility in rice (Oryza sativa L). Journal of Agronomy and Crop Science 194, 135-140.
Wu, W., Huang, J., Cui, K., Nie, L., Wang, Q., Yang, F., Shah, F., Yao, F., and Peng, S. (2012). Sheath blight reduces stem breaking resistance and increases lodging susceptibility of rice plants. Field Crops Research 128, 101-108.
Xu, X., Hayashi, N., Wang, C.-T., Fukuoka, S., Kawasaki, S., Takatsuji, H., and Jiang, C.-J. (2014). Rice blast resistance gene Pikahei-1 (t), a member of a resistance gene cluster on chromosome 4, encodes a nucleotide-binding site and leucine-rich repeat protein. Molecular breeding 34, 691-700.
Zarbafi, S. S., and Ham, J. H. (2019). An overview of rice QTLs associated with disease resistance to three major rice diseases: blast, sheath blight, and bacterial panicle blight. Agronomy 9, 177.
Zhang, F., and Xie, J. (2014). Genes and QTLs resistant to biotic and abiotic stresses from wild rice and their applications in cultivar improvements. Rice-Germplasm, Genetics and Improvement, 59-78.
Zhou-qi, C., Bo, Z., Guan-lin, X., Bin, L., and Shi-wen, H. (2016). Research status and prospect of Burkholderia glumae, the pathogen causing bacterial panicle blight. Rice Science 23, 111-118.
Zhou, B., Qu, S., Liu, G., Dolan, M., Sakai, H., Lu, G., Bellizzi, M., and Wang, G.-L. (2006). The eight amino-acid differences within three leucine-rich repeats between Pi2 and Piz-t resistance proteins determine the resistance specificity to Magnaporthe grisea. Molecular plant-microbe interactions 19, 1216-1228.
Zhu, W., MaGbanua, M. M., and White, F. F. (2000). Identification of two novel hrp-associated genes in the hrp gene cluster of Xanthomonas oryzae pv. oryzae. Journal of bacteriology 182, 1844-1853.
Downloads
Published
Issue
Section
Categories
License
Copyright (c) 2024 J AKRAM, N NAEEM, M ASHFAQ, A ABBAS (Author)
This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.
